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technical note

Deep understanding of cell and gene therapy genome editing protocols enabled with single-cell sequencing

Cell and gene therapies are yielding new treatments, which were inconceivable only a few decades ago, for genetic disorders including cancers and inherited diseases. Single-cell DNA sequencing on the Tapestri Platform provides the most sensitive and nuanced quantification of genetic edits made to single cells with a simple one-day high-throughput workflow. In this app note, we demonstrate the workflow and experimental designs for using single-cell DNA sequencing to analyze genetic edits, and discuss the results including quantification of on- and predicted off- target edits for multiple targets, zygosity, and translocations within in population of single cells.


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technical note
In-depth quantification of cell and gene therapy DNA integrations enabled with single-cell sequencing
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Model organisms and patient-derived xenografts for preclinical oncology research
technical note
Correlations between genomic variants and protein expression in AML patient samples
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AML subpopulations defined by SNV, CNV, and protein expression
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